RxDock
0.1.0
A fast, versatile, and open-source program for docking ligands to proteins and nucleic acids
Loading...
Searching...
No Matches
include
rxdock
ConstSF.h
1
/***********************************************************************
2
* The rDock program was developed from 1998 - 2006 by the software team
3
* at RiboTargets (subsequently Vernalis (R&D) Ltd).
4
* In 2006, the software was licensed to the University of York for
5
* maintenance and distribution.
6
* In 2012, Vernalis and the University of York agreed to release the
7
* program as Open Source software.
8
* This version is licensed under GNU-LGPL version 3.0 with support from
9
* the University of Barcelona.
10
* http://rdock.sourceforge.net/
11
***********************************************************************/
12
13
// Scoring function to penalise ligand and solvent binding
14
// Ligand binding RawScore is always 1
15
// Solvent binding RawScore is:
16
// SOLVENT_PENALTY * the number of enabled solvent models
17
#ifndef _RBTCONSTSF_H_
18
#define _RBTCONSTSF_H_
19
20
#include "rxdock/BaseInterSF.h"
21
22
#include <nlohmann/json.hpp>
23
24
using
json = nlohmann::json;
25
26
namespace
rxdock {
27
28
class
ConstSF
:
public
BaseInterSF
{
29
public
:
30
// Static data member for class type (i.e. "ConstSF")
31
static
const
std::string _CT;
32
static
const
std::string _SOLVENT_PENALTY;
33
34
ConstSF
(
const
std::string &strName =
"const"
);
35
virtual
~ConstSF
();
36
37
virtual
void
ScoreMap(StringVariantMap &scoreMap)
const
;
38
39
friend
void
to_json(json &j,
const
ConstSF
&consf);
40
friend
void
from_json(
const
json &j,
ConstSF
&consf);
41
42
protected
:
43
virtual
void
SetupReceptor() {}
44
virtual
void
SetupLigand() {}
45
virtual
void
SetupScore() {}
46
virtual
double
RawScore()
const
;
47
void
ParameterUpdated(
const
std::string &strName);
48
49
private
:
50
// The original constant score for ligand binding
51
double
InterScore()
const
;
52
// The solvent binding penalty
53
double
SystemScore()
const
;
54
double
m_solventPenalty;
55
};
56
void
to_json(json &j,
const
ConstSF
&consf);
57
void
from_json(
const
json &j,
ConstSF
&consf);
58
59
}
// namespace rxdock
60
61
#endif
//_RBTCONSTSF_H_
rxdock::BaseInterSF
Definition
BaseInterSF.h:27
rxdock::ConstSF
Definition
ConstSF.h:28
Generated by
1.9.7