VdwIntraSF.h

/***********************************************************************
 * The rDock program was developed from 1998 - 2006 by the software team
 * at RiboTargets (subsequently Vernalis (R&D) Ltd).
 * In 2006, the software was licensed to the University of York for
 * maintenance and distribution.
 * In 2012, Vernalis and the University of York agreed to release the
 * program as Open Source software.
 * This version is licensed under GNU-LGPL version 3.0 with support from
 * the University of Barcelona.
 * http://rdock.sourceforge.net/
 ***********************************************************************/
 
// Ligand intramolecular scoring function for vdw potential
 
#ifndef _RBTVDWINTRASF_H_
#define _RBTVDWINTRASF_H_
 
#include "rxdock/BaseIntraSF.h"
#include "rxdock/VdwSF.h"
 
#include <nlohmann/json.hpp>
 
using json = nlohmann::json;
 
namespace rxdock {
 
class VdwIntraSF : public BaseIntraSF, public VdwSF {
public:
  // Class type string
  static const std::string _CT;
 
  RBTDLL_EXPORT VdwIntraSF(const std::string &strName = "vdw");
  virtual ~VdwIntraSF();
 
  friend void to_json(json &j, const VdwIntraSF &vdwIntraSF);
  friend void from_json(const json &j, VdwIntraSF &vdwIntraSF);
 
  // Request Handling method
  // Handles the Partition request
  virtual void HandleRequest(RequestPtr spRequest);
 
protected:
  virtual void SetupScore();
  virtual double RawScore() const;
 
  // DM 25 Oct 2000 - track changes to parameter values in local data members
  // ParameterUpdated is invoked by ParamHandler::SetParameter
  void ParameterUpdated(const std::string &strName);
 
private:
  AtomRListList m_vdwIntns; // The full list of vdW interactions
  AtomRListList
      m_prtIntns; // The partitioned interactions (within partition distance)
  AtomRList m_ligAtomList;
};
 
void to_json(json &j, const VdwIntraSF &vdwIntraSF);
void from_json(const json &j, VdwIntraSF &vdwIntraSF);
 
} // namespace rxdock
 
#endif //_RBTVDWINTRASF_H_