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RxDock 0.1.0
A fast, versatile, and open-source program for docking ligands to proteins and nucleic acids
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RxDock 0.1.0
A fast, versatile, and open-source program for docking ligands to proteins and nucleic acids
|
This is the complete list of members for rxdock::ChromPositionElement, including all inherited members.
| _CT (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | static |
| _THRESHOLD (defined in rxdock::ChromElement) | rxdock::ChromElement | static |
| Add(ChromElement *pChromElement) (defined in rxdock::ChromElement) | rxdock::ChromElement | virtual |
| CauchyMutate(double mean, double variance) (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| ChromElement() (defined in rxdock::ChromElement) | rxdock::ChromElement | protected |
| ChromElement(const ChromElement &c) (defined in rxdock::ChromElement) | rxdock::ChromElement | protected |
| ChromPositionElement(const Model *pModel, const DockingSite *pDockSite, double transStepSize, double rotStepSize, ChromElement::eMode transMode=ChromElement::FREE, ChromElement::eMode rotMode=ChromElement::FREE, double maxTrans=0.0, double maxRot=0.0) (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | |
| ChromPositionElement(ChromPositionRefDataPtr spRefData, const Coord &com, const Euler &orientation) (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | protected |
| ChromPositionElement() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | protected |
| clone() const (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| Compare(const ChromElement &c) const (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| CompareVector(const std::vector< double > &v, int &i) const (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| CorrectTetheredCOM() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | protected |
| CorrectTetheredOrientation() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | protected |
| eMode enum name (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| Equals(const ChromElement &c, double threshold) const (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| FIXED enum value (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| FREE enum value (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| GetLength() const (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | inlinevirtual |
| GetRand() const (defined in rxdock::ChromElement) | rxdock::ChromElement | inline |
| GetStepVector(std::vector< double > &v) const (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| GetThreshold() (defined in rxdock::ChromElement) | rxdock::ChromElement | static |
| GetVector(std::vector< double > &v) const (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| GetVector(XOverList &v) const (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| GetXOverLength() const (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | inlinevirtual |
| ModeToStr(eMode mode) (defined in rxdock::ChromElement) | rxdock::ChromElement | static |
| Mutate(double relStepSize) (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| MutateCOM(double relStepSize) (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | protected |
| MutateOrientation(double relStepSize) (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | protected |
| operator=(const ChromElement &c) (defined in rxdock::ChromElement) | rxdock::ChromElement | protected |
| Print(std::ostream &s) const (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| Randomise() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| RandomiseCOM() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | protected |
| RandomiseOrientation() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | protected |
| Reset() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| SetVector(const std::vector< double > &v, int &i) (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| SetVector(const XOverList &v, int &i) (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| SetVector(const std::vector< double > &v) (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| SetVector(const XOverList &v) (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| StandardisedValue(double rotationAngle) (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | static |
| StrToMode(const std::string &modeStr) (defined in rxdock::ChromElement) | rxdock::ChromElement | static |
| SyncFromModel() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| SyncToModel() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
| TETHERED enum value (defined in rxdock::ChromElement) | rxdock::ChromElement | |
| VectorOK(const std::vector< double > &v, unsigned int i) const (defined in rxdock::ChromElement) | rxdock::ChromElement | protected |
| VectorOK(const XOverList &v, unsigned int i) const (defined in rxdock::ChromElement) | rxdock::ChromElement | protected |
| ~ChromElement() (defined in rxdock::ChromElement) | rxdock::ChromElement | virtual |
| ~ChromPositionElement() (defined in rxdock::ChromPositionElement) | rxdock::ChromPositionElement | virtual |
1.9.7